BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A11LP1|AL427708
(566 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig196 717 0.0
>3x_Contig196
Length = 1254
Score = 717 bits (359), Expect = 0.0
Identities = 362/365 (99%)
Strand = Plus / Plus
Query: 6 ttttgagggcgtttcagtggatactcaatctctgtgctggctttgtttcccaaattaagc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 ttttgagggcgtttcagtggatactcaatctctgtgctggctttgtttcccaaattaagc 949
Query: 66 aaagttaagaaaacaaataggcctagtgccattatcttgtgagaactgtcgaatagcttg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 aaagttaagaaaacaaataggcctagtgccattatcttgtgagaactgtcgaatagcttg 1009
Query: 126 acattttctctgtggccttttattgtttggatacattctgatatagcaactgtaggcaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 acattttctctgtggccttttattgtttggatacattctgatatagcaactgtaggcaat 1069
Query: 186 ttttccaatkagaattcaatagtgattctgtgatagagatacctgadatctttgaaacgg 245
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1070 ttttccaattagaattcaatagtgattctgtgatagagatacctgaaatctttgaaacgg 1129
Query: 246 aagggtcggaaattagcagcgcataacttgaagaagaaggtgtttcctacacgttgaaac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 aagggtcggaaattagcagcgcataacttgaagaagaaggtgtttcctacacgttgaaac 1189
Query: 306 cgccattttttcagtatcaggagtggtccttttcatactttgatagarcgttaagtgcca 365
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1190 cgccattttttcagtatcaggagtggtccttttcatactttgatagaacgttaagtgcca 1249
Query: 366 gctgt 370
|||||
Sbjct: 1250 gctgt 1254
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4157
Number of Sequences: 1807
Number of extensions: 4157
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 566
length of database: 10,358,551
effective HSP length: 16
effective length of query: 550
effective length of database: 10,329,639
effective search space: 5681301450
effective search space used: 5681301450
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)